HELP WITH Clin Lab Sci Online:
Help with Searching
- Introduction
- General Rules
- Main Search Strategies
- Extra Benefits of Full-Text Searching
- The Order of Displayed Results
- Using "Phrases"
- Using "Wildcards"
- Boolean Logic
- Capitalization and Punctuation
- Stemming
- Search Term Highlighting
- Search Errors
Introduction
- When searching for an article, searches that are specific will run faster and will be more
likely to return the actual article(s) of interest. For best results, you should enter the
minimum amount of information necessary to uniquely identify the article or articles, such
as volume/page number, authors, and/or specific key words. This specificity can be
achieved through prior knowledge, appropriate use of phrasing and Boolean logic, and
application of some specific search advice.
General Rules
- There are two search boxes. The
Search by Citation
box always takes precedence
over the Search by Authors or Keywords
box, so an invalid citation in the top
box will return no articles even if there is a valid citation in the bottom box. All
fields in either box are connected with an AND expression, while words in a field in a
specific box are connected by OR.
Main Search Strategies
What you know |
How to find the article(s) |
Exact citation |
Enter the volume and starting page number in the Search by Citation box.
This will uniquely identify the article, making it unnecessary to enter data in the other
search box. |
Partial citation |
If you just know the starting page number, try entering it in the Search by
Citation box. The starting page -- even without a volume -- is still a fairly unique
identifying number. Other citation information can be entered in the Search by
Authors or Keywords box. |
Title (or partial title) |
Full titles, or fragments thereof, should be entered in "quotation marks."
This forces a phrase search rather than our search engine searching for each word
separately. For example,
"Life and death of a cell"
will return a specific article
Life and death of a cell
will return all articles containing the terms life , death , or
cell in the title. |
Author(s) |
Authors can be entered in the "Author" field, one per box. The last
name is the main identifier; first (F) initial can be used to further specify your search.
If you use initials, they should be entered in the form Lastname, F. (for example,
Pete, P. - note also that the initial is optional, though middle initials can be included as well).
Characters
not falling in the English A-Z alphabet cannot be searched, and should be dealt with using a
wildcard.
Note that authors with hyphenated last names can be searched
using the part of the name before or after the hyphen, or both (including the hyphen is optional).
Authors with last names that have multiple parts (such as de Castro or
O'Leary ) may be searched using the full last name (searching on de Castro or O'Leary ).
First initials can also be used in the search, in the same format as mentioned above (Lastname, F. ). |
Keywords or Subjects |
Keywords can either be searched in the Title/Abstract, or anywhere in the article (which
includes the title/abstract). The search engine connects multiple words (where a word is
text between spaces, or a combination of characters and spaces between quotation marks)
with OR statements. Single letters and common words cannot be searched -- a search for
protein kinase c
will cause an error since every article in the entire journal will
have a c in it; searching for
"protein kinase c "
(forcing a phrase match) will yield better results. |
Date Ranges |
Date ranges (at the bottom of the Search by Authors or Keywords box) can
narrow your search in 2 ways. You can limit the search to recent articles, or specifically
to older articles if you know that (for example) an article by Smith was published in 1996.
Date ranges can also be used to limit the search results to articles for which the full
text is available on-line by noting the starting date for full-text availability and
setting the From date accordingly. |
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Extra Benefits of Full-Text Searching
- Searching the full text of an article can reveal much more information than a simple
abstract search. More information than just the results and discussion is indexed; this
information can be used to identify articles that are related in ways separate from the
subject of the research. The following table illustrates how full-text searches can identify a
valuable range of articles.
What you want to find |
How to find it |
Articles from a particular institution |
Since authors' addresses and affiliations are indexed, they can be searched. For
example, a full-text search for
Purdue
will return articles by an author claiming a
Purdue affiliation (as well as any articles written by someone named "Purdue").
This technique can also be used to help narrow down an author search, especially in cases
where the author's name is fairly common. In this case, enter the author's name in the
"Author" field, and the institution (or better yet, just a single word to
identify it) in the "Word(s) Anywhere in Article" field.
|
Articles that cite a paper written by a certain author |
It is often desirable to find articles that have referenced an important author or
paper. This can be achieved by searching for the author's last name in the
"Word(s) Anywhere in Article" field. Such a search will return all articles written by the
author, as well as any articles that cite an article written by the author.
To find articles that cite a specific known article, enter the citation information in the
"Word(s) Anywhere in Article" field in the following format:
journal AND volume AND starting page
For example, if the query
science AND 278 AND 1632
were entered in the "Word(s) Anywhere in Article" field, all articles that cited
this article will be returned.
|
Articles using a special reagent or technique |
Articles using a particular technique can be easily identified by entering a keyword for
the technique in the "Word(s) Anywhere in Article" field. For example, to
retrieve articles that used Adobe Photoshop in the preparation and analysis of data, a
search for
photoshop
in the appropriate field will return articles with that in
common.
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The Order of Displayed Results
- Search results are listed in order of 'relevance' - in general, this means that articles
which contain the greatest number of the search terms in the greatest frequency will be
listed first. In practice, this means that if you enter
signal transduction
into the "Words anywhere in article" box, the search engine will find all articles which
include either the term signal
or the term transduction
, but will list any
which use both terms before any which use only one or the other, and will list articles
which use the terms more frequently before those which use them less. Articles in which
the word appears in the Title/Abstract are listed before articles containing the term(s)
only in the text.
Using "Phrases"
- Words in a field are assumed to be connected by a Boolean OR statement unless otherwise
specified. One way to connect two words is by enclosing them in quotation marks. For
example, the search
signal transduction
will return articles which include either the term signal
or the term transduction
(or both). A phrase search enclosed in quotation marks:
"signal transduction"
will only return articles where the term transduction
immediately follows the term
signal
; articles containing only signal
, only transduction
, or even
"transduction
signal
" are not returned.
Using "Wildcards"
- The wildcard character (*) can be used to search the beginning fragments of words, forcing
a match with any word containing a given root. Although this function is somewhat
duplicated with the search engine's Stemming feature, proper use of a wildcard can return a
range of potentially interesting documents. For example, a search for
child*
will return articles containing child
, childcare
, and children
;
likewise, a search for
phospha*
will return articles containing phosphatase
and phosphate
.
Wildcards can also be used to truncate words before non-English characters such as an umlaut
(ü
) or an accent (é
). Since these characters cannot be searched, a word such as
the author name Grundström
should be searched as Grundstr
*. Note that
wildcards can only be used after characters; any characters following a wildcard in a
single word will be discarded, and may cause an error.
Boolean Logic
- Basic useful Boolean terms include
AND
,
OR
, NOT
, and
( )
. These terms are used to connect
the words in a search. They can be used by themselves or in combination to specify your
search terms. Although Boolean terms can be used in the "Author" field (with
last names only), they are most commonly used in the "Word(s)" fields. Words
within a field are assumed to be connected by OR
unless otherwise specified. The OR
connector is not often
used since it is the default expression between terms. However, it
can be helpful in organizing a complex query.
The AND
connector limits the search results to articles that contain all of terms that are
connected by AND
. For example, a search for
human diseases
will return all articles
that contain the term human
or the term diseases
(and depending on the
journal, this could cause an error). In practice, this will retrieve articles as diverse
as human evolution and avian diseases. Inserting an AND
statement like so:
human AND diseases
ensures that only articles that mention both human
and diseases
will be returned.
The NOT
term can be used to exclude articles containing certain terms. For example, if you
wanted to search for articles about the gene called sos
that did not deal with
Drosophila
, the search would be constructed as such:
sos NOT drosophila
For more complex searches, these operators may be combined with one another, optionally
using parentheses to group terms to avoid ambiguity in a complex query. For example,
("signal transduction" AND (phosphorylation OR kinase)) NOT xenopus
finds only articles which use the phrase "signal transduction
" and either the word
phosphorylation
or the word kinase
, but do not mention the word
Xenopus
.
NOTE that when using boolean terms, it does not matter if you select 'any' 'all' or
'phrase' from the 'words:' section. They will all produce the same result
when combined with boolean operators.
Capitalization and Punctuation
- Searches are case-insensitive as long as lower-case letters are used; upper-case search
terms will retrieve only articles where the upper-case term is used. For example, a search
for
thrombin
will return all articles containing the term, but a search for
Thrombin
will generally return articles where Thrombin
is the first word in a
sentence. In general, you should use lower-case in all of your searches unless you have a
specific reason to do otherwise.
Punctuation is not searched and is treated as a space. The only exceptions to this are
parentheses "()
" and asterisks "*
", and the use of a hyphen
"-
" in author's names. Therefore, the parentheses and
the wildcard character have special meaning in the search context
and cannot be searched in the text. If a search term includes punctuation (such as a dash
"-
" or a plus "+
"), enclose the whole word in quotation marks to
ensure that proper spacing is maintained in the search.
Stemming
- The search mechanism uses a "stemming" mechanism to find words which are similar to the
words you enter. For example, a search on
transcription
may turn up articles containing similar words such as transcript
and
transcribed
. These additional words may not always be highlighted in the text. If
you wish to disable stemming, enclose each individual term in quotation marks. If you do
so, and also use Boolean connectors to combine terms, be sure that
AND, OR, or NOT are not included in the quotation
marks.
Search Term Highlighting
- Search terms are highlighted in bold text in the title display of the search result, as well
as in articles and Abstracts viewed from a search result. All words longer than four
letters specified are highlighted, whether or not they are combined by quotation marks. For
example, a search on
"motor cortex"
will highlight instances of the phrase "motor cortex
", as well as any uses
of the words motor
or cortex
.
Search Errors
- There are two reasons that you may not get any articles back from your search: an error
occurred with the search engine program itself, or there may not be any articles matching
the search criteria.
If your search was executed properly but did not return any articles, the message
"Your search retrieved zero articles." will be displayed at the top of the
screen, along with some suggestions for narrowing your search. In this case, the search
can be broadened as described above to redefine the search. Appropriate use of wildcards
with search terms, or author names for which you are not sure of the exact spelling, can
also help. There is also the possibility that no articles matching your interests are
in the journal's collection.
When a true search error occurs, the message "There was a problem with our search
system." will appear at the top of the screen. This most commonly means that too
many articles were returned. This will happen if a common word (for example, and
or the
) is used. Single letters not included in a phrase will return similar
errors. Finally, note that parentheses and quotation marks come in sets: if only one is
used, an error will result. Ensure that you are not using common words or single
characters; if the error cannot be resolved, send us feedback describing the problem.
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